Publications

Welcome to our lab’s Publications page! Here, you can explore our research outputs.

Browse Publications

Jeong A Han, Jaeyeon Lee, Hee Jung An, Eun Seob Yi, Yeongjun Kim, Bon-kyoung Koo, Heetak Lee, Eun Yu Kim, Ho-Seok Lee (2025). Exploring the Panax ginseng C.A.Meyer Soil Metagenome to Uncover Antagonistic Bacteria Against Ginseng Root Rot Disease [Under Review]. In Journal of Ginseng Research.

Hyeonmin Ryu, Sejin Choi, Mengwei Cheng, Bon-kyoung Koo, Eun Yu Kim, Ho-Seok Lee, Du-Hwa Lee (2025). Frontline Combat Manual for Plant Defense: Insights from Navigating the Flagellin Sensing Mechanisms [Under Revision]. In Plant Communications.

Hyeonsik Yoon, Jaeyeon Lee, Yeongjun Kim, Jeong A. Han, Ho-Seok Lee, Eun Yu Kim (2024). Genome report of Peribacillus simplex strain IMGN9 isolated from soil. In Microbiology Resource Announcements.

Hyeomin Ryu, Soomin Kim, Yeongjun Kim, Jeong A. Han, Eun Yu Kim, Ho-Seok Lee (2024). Complete genome sequence of Pseudomonas fluorescens IMGN2 isolated from undisturbed soil. In Microbiology Resource Announcements.

Jaeyeon Lee, Bon-Jin Ku, Yeongjun Kim, Jeong A. Han, Eun Yu Kim, Ho-Seok Lee (2024). Draft genome sequence of Pseudomonas alkylphenolica, IMGN1, isolated from soil. In Microbiology Resource Announcements.

Seijin Choi, Hoseong Jung, Yeongjun Kim, Jeong A. Han, Eun Yu Kim, Ho-Seok Lee (2024). Draft genome sequence of Priestia megaterium strain IMGN3 derived from soil. In Microbiology Resource Announcements.

Yeongjun Kim, Sangmin Lee, Eunjeong Kim, Jeong A. Han, Eun Yu Kim, Ho-Seok Lee (2024). Draft genome sequence of Bacillus proteolyticus strain IMGN4 from soil. In Microbiology Resource Announcements.

Hoseong Jung, Seijin Choi, Yeongjun Kim, Jeong A. Han, Ho-Seok Lee, Eun Yu Kim (2024). Complete genome sequence of Bacillus paramobilis sp. strain IMGN7 from soil. In Microbiology Resource Announcements.

Keun Pyo Lee, Kaiwei Liu, Eun Yu Kim, Laura Medina-Puche, Haihong Dong, Rahul Mohan Singh, Mengping Li, Shan Qi, Jungnam Cho, Heng Zhang, Rosa Lozano-Duran, Chanhong Kim (2024). The m6A reader ECT1 drives mRNA sequestration to dampen salicylic acid–dependent stress responses in Arabidopsis. In The Plant Cell.

Kevin Liu, Keun Pyo Lee, Jianli Duan, Eun Yu Kim, Rahul Mohan Singh, Minghui Di, Zhuoling Meng, Chanhong Kim (2023). Cooperative Role of AtRsmD and AtRimM Proteins in Modification and Maturation of 16S rRNA in Plastids. In The Plant Journal.

Eun Yu Kim (2022). A Method for Tracking Transposition of Genetic Material. PCT (Application) No. PCT/KR2022/018189.

Nahyun Cho, Og-Geum Woo, Eun Yu Kim, Kiyoul Park, Dong Hye Seo, Seonggwan Yu, Yoon A Choi, Jihee Lee, Jae-Hoon Lee, Wootaek Kim (2022). E3 ligase AtAIRP5/GARU regulates drought stress response by stimulating SERINE CARBOXYPEPTIDASE-LIKE1 turnover. In Plant Physiology.

Yunseok Heo, Inhwan Lee, Sunjin Moon, Ji-Hye Yun, Eun Yu Kim, Sam-Yong Park, Jae-Hyun Park, Wootaek Kim, Weontae Lee (2022). Crystal Structures of the Plant Phospholipase A1 Proteins Reveal a Unique Dimerization Domain. In Molecules.

Kaiwei Liu, Keun Pyo Lee, Jianli Duan, Eun Yu Kim, Rahul Mohan Singh, Minghui Di, Zhuoling Meng, Chanhong Kim (2022). Plastid-specific RsmD methyltransferase and ribosome maturation factor RimM are crucial for 16S rRNA maturation and proteostasis.

Wenwen Fan, Ling Wang, Jie Chu, Hui Li, Eun Yu Kim, Jungnam Cho (2022). Tracing Mobile DNAs: From Molecular to Population Scales. In Frontiers in Plant Science (Co-Corresponding Author).

Eun Yu Kim, Kyungdo Kim, Jungnam Cho (2021). Harnessing epigenetic variability for crop improvement: current status and future prospects. In Genes & Genomics.

Zhen Lei, Eun Yu Kim, Jungnam Cho (2021). Enrichment of Cytoplasmic RNA Granules from Arabidopsis Seedlings. In Bio-Protocol.

Zhen Lei, Ling Wang, Eun Yu Kim, Jungnam Cho (2021). Enrichment of Cytoplasmic RNA Granules from Arabidopsis Seedlings. In Plant Journal.

Jungnam Cho, Eun Yu Kim (2021). A Method for Tracking Transposition of Genetic Material. PCT (Application) No. PCT/KR2021/009179.

Ling Wang, Eun Yu Kim, Jungnam Cho (2021). High-Throughput Profiling of Extrachromosomal Linear DNAs of Long Terminal Repeat Retrotransposons by ALE-seq. In Methods in Molecular Biology.

Eun Yu Kim, Wenwen Fan, Jungnam Cho (2021). Determination of TE Insertion Positions Using Transposon Display. In Methods in Molecular Biology.

Eun Yu Kim, Ling Wang, Zhen Lei, Hui Li, Wenwen Fan, Jungnam Cho (2021). Ribosome stalling and SGS3 phase separation prime the epigenetic silencing of transposons. In Nature Plants.

Keun Pyo Lee, Kaiwei Liu, Eun Yu Kim, Laura Medina-Puche, Haihong Dong, Jianli Duan, Mengping Li, Vivek Dogra, Yingrui Li, Ruiqing Lv, Zihao Li, Rosa Lozano-Duran, Chanhong Kim (2020). Plastid-specific RsmD methyltransferase and ribosome maturation factor RimM are crucial for 16S rRNA maturation and proteostasis. In The Plant Cell.

Eun Yu Kim, Ling Wang, Zhen Lei, Hui Li, Wenwen Fan, Jungnam Cho (2020). Translational inhibition and phase separation primes the epigenetic silencing of transposons.

Jungnam Cho, Eun Yu Kim (2020). A Method for Detecting Transposable Genetic Material in a Biological Sample Based on Codon Optimality. PCT (Application) No. PCT/KR2020/004782.

Jungnam Cho, Jerzy Paszkowski, Eun Yu Kim (2019). A Method for Detecting Transposable Element in a Biological Sample. PCT (Application) No. PCT/KR2019/005665.

Hongxing Yang, Ling Wang, Eun Yu Kim, Haihong Dong, Xia Zhang, Haiyan Zhuang (2018). Cloning of Orchid Mosaic Virus Strain and Construction of Its Transcription Vector. Chinese Patent (Application) No. 2018113790073.

Wootaek Kim, Eun Yu Kim, Jiho Seo, Kiyoul Park (2018). Gene Implicated in Abiotic Stress Tolerance and Growth Accelerating and Use Thereof. United States Patent Registration No. 10,017,779.

Jinwon Lee, Woon Heo, Jinu Lee, Narae Jin, Seimee Yoon, Kiyoul Park, Eun Yu Kim, Wootaek Kim, Jooyoung Kim (2018). The B cell death function of obinutuzumab-HDEL produced in plant (Nicotiana benthamiana L.) is equivalent to obinutuzumab produced in CHO cells. In Plos One.

Kiyoul Park, Wootaek Kim, Eun Yu Kim (2018). The proper localization of RESPONSIVE TO DESICCATION 20 in lipid droplets depends on their biogenesis induced by STRESS-RELATED PROTEINS in vegetative tissues. In Biochemical and Biophysical Research Communications.

Taeyoon Kim, Wootaek Kim, Eun Yu Kim, Jiho Seo, Kiyoul Park, Wontae Lee (2017). Establishment of Cost-effective Human SOD3 (EC-SOD) Gene and Recombinant EC-SOD Production in Plants at a Large-scale. Korean Patent Registration No. 10-2015-0143306.

Wootaek Kim, Eun Yu Kim, Jiho Seo, Kiyoul Park (2017). Gene Implicated in Abiotic Stress Tolerance and Growth Accelerating and Use Thereof. United States Patent Registration No. 9,534,231.

Dong Hye Seo, Min Yong Ahn, Ki Youl Park, Eun Yu Kim, Wootaek Kim (2016). The N-Terminal UND Motif of the Arabidopsis U-Box E3 Ligase PUB18 Is Critical for the Negative Regulation of ABA-Mediated Stomatal Movement and Determines Its Ubiquitination Specificity for Exocyst Subunit Exo70B1. In The Plant Cell.

Wootaek Kim, Eun Yu Kim, Jiho Seo, Kiyoul Park (2016). Gene Implicated in Abiotic Stress Tolerance and Growth Accelerating and Use Thereof. United States Patent (Application) No. 15_178,905.

Eun Yu Kim, Kiyoul Park, Youngsam Seo, Wootaek Kim (2016). Arabidopsis Small Rubber Particle Protein Homolog SRPs Play Dual Roles as Positive Factors for Tissue Growth and Development and in Drought Stress Responses. In Plant Physiology.

Kiyoul Park, Eun Yu Kim, Youngsam Seo, Wootaek Kim (2016). Constitutive expression of CaPLA1 conferred enhanced growth and grain yield in transgenic rice plants. In Plant Molecular Biology.

Kiyoul Park, Eun Yu Kim, WeontaeLee, Tae-Yoon Kim, Wootaek Kim (2015). Expression, subcellular localization, and enzyme activity of a recombinant human extra-cellular superoxide dismutase in tobacco (Nicotiana benthamiana L.). In Protein Expression and Purification.

Wootaek Kim, Eun Yu Kim, Moonyoung Ryu, Yoon A Choi (2015). Gene Implicated in Drought Stress Tolerance and Transformed Plants with The Same. Korean Patent Registration No. 10-1564748.

Eun Yu Kim, Youngsam Seo, Kiyoul Park, Soojin Kim, Wootaek Kim (2014). Overexpression of CaDSR6 increases tolerance to drought and salt stresses in transgenic Arabidopsis plants. In Gene.

Wootaek Kim, Eun Yu Kim, Jiho Seo, Kiyoul Park (2014). Gene Implicated in Abiotic Stress Tolerance and Growth Accelerating and Use Thereof. Korean Patent Registration No. 10-1446253.

Wootaek Kim, Eun Yu Kim, Jiho Seo, Kiyoul Park (2014). Gene Implicated in Abiotic Stress Tolerance and Growth Accelerating and Use Thereof. Korean Patent Registration No. 10-1438738.

Wootaek Kim, Eun Yu Kim, Jiho Seo, Kiyoul Park (2014). Gene Implicated in Abiotic Stress Tolerance and Growth Accelerating and Use Thereof. Korean Patent Registration No. 10-1416506.

Wootaek Kim, Eun Yu Kim, Moonyoung Ryu, Yoon A Choi (2014). Gene Implicated in Drought Stress Tolerance and Transformed Plants with The Same. United States (Application) No. 14/258908.

Wootaek Kim, Eun Yu Kim, Soojin Kim (2014). Gene Implicated in Plant Stress Tolerance and Use Thereof. Korean Patent Registration No. 10-1383331.

Wootaek Kim, Eun Yu Kim, Jiho Seo, Kiyoul Park (2013). Gene Implicated in Abiotic Stress Tolerance and Growth Accelerating and Use Thereof. European Patent (Application) No. EP13181236.4.

Wootaek Kim, Eun Yu Kim, Jiho Seo, Kiyoul Park (2013). Gene Implicated in Abiotic Stress Tolerance and Growth Accelerating and Use Thereof. United States Patent (Application) No. 13/964071.

Wootaek Kim, Eun Yu Kim, Jiho Seo, Kiyoul Park (2013). Gene Implicated in Abiotic Stress Tolerance and Growth Accelerating and Use Thereof. European Patent (Application) No. 13/181236.1.

Wootaek Kim, Eun Yu Kim, Jiho Seo (2013). Gene Implicated in Drought Stress Tolerance and Growth Acceleration and Transformed Plants with The Same. Korean Patent Registration No. 10-1291365.

Wootaek Kim, Eun Yu Kim, Jiho Seo (2012). Gene Implicated in Drought Stress Tolerance and Growth Acceleration and Transformed Plants with The Same. PCT (Application) No. PCT/KR2012/008437.

Wootaek Kim, Eun Yu Kim, Youngsam Seo (2011). Gene Implicated in Seed Storage and Germination and Use Thereof. Korean Patent Registration No. 10-1100912.

Youngsam Seo, Eun Yu Kim, Wootaek Kim (2011). The Arabidopsis sn-1-specific mitochondrial acylhydrolase AtDLAH is positively correlated with seed viability. In Journal of Experimental Botany.

Eun Yu Kim, Youngsam Seo, Wootaek Kim (2011). AtDSEL, an Arabidopsis Cytosolic DAD1-like Acylhydrolase, is Involved in Negative Regulation of Storage Oil Mobilization During Seedling Establishment. In Journal of Plant Physiology.

Wootaek Kim, Eun Yu Kim, Soojin Kim (2010). Gene Implicated in Plant Stress Tolerance and Use Thereof. PCT (Application) No. PCT/KR2010/007468.

Eun Yu Kim, Youngsam Seo, Hanna Lee, Wootaek Kim (2010). Constitutive expression of CaSRP1, a hot pepper small rubber particle protein homolog, resulted in fast growth and improved drought tolerance in transgenic Arabidopsis plants. In Planta.

Sohyun Kwon, Byungha Lee, Eun Yu Kim, Youngsam Seo, Sangman Lee, Wootaek Kim, Jongtae Song, Jeonghoe Kim (2009). Overexpression of a Brassica rapa NGATHA Gene in Arabidopsis thaliana Negatively Affects Cell Proliferation During Lateral Organ and Root Growth. In Plant and Cell Physiology.

Youngsam Seo, Eun Yu Kim, Jeonghoe Kim, Wootaek Kim (2009). Enzymatic characterization of class I DAD1-like acylhydrolase members targeted to chloroplast in Arabidopsis. In FEBS Letters.

Ora Son, Seokkeun Cho, Eun Yu Kim, Wootaek Kim (2009). Characterization of three Arabidopsis homologs of human RING membrane anchor E3 ubiquitin ligase. In Plant Cell Reports.

Wootaek Kim, Eun Yu Kim, Youngsam Seo, Hyounggon Mang (2008). Hot pepper CaPLA1 Gene Implicated in Growth Acceleration and Transformed Plants with The Same. Korean Patent Registration No. 10-0871591.

Youbong Hyun, Sungwook Choi, Hyun-Ju Hwang, Jihyeon Yu, Sang-Jip Nam, Jaeyoung Ko, Ju-Young Park, Youngsam Seo, Eun Yu Kim, Stephen Beungtae Ryu, Wootaek Kim, Yong-Hwan Lee, Heonjoong Kang, Ilha Lee (2008). Cooperation and Functional Diversification of Two Closely Related Galactolipase Genes for Jasmonate Biosynthesis. In Developmental Cell.

Youngsam Seo, Eun Yu Kim, Hyunggon Mang, Wootaek Kim (2007). Heterologous expression, and biochemical and cellular characterization of {CaPLA}1 encoding a hot pepper phospholipase A1 homolog. In Plant Journal.

Sunjoo Joo, Youngsam Seo, Eun Yu Kim, Dongki Hong, Kyyoung Park, Wootaek Kim (2005). Brassinosteroid induction of AtACS4 encoding an auxin-responsive 1-aminocyclopropane-1-carboxylate synthase 4 in Arabidopsis seedlings. In Physiola Plantarum.

Jong-Pil Hong, Eun Yu Kim, Moonyoung Ryu, Sunghwa Choe, Phunbum Park, Gynheung An, Wootaek Kim (2005). Structure and expression of OsMRE11 in rice. In Journal of Plant Biology.